BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021A06SP1|AL427702
(472 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 390 e-108
>3x_Contig1619
Length = 7770
Score = 390 bits (184), Expect = e-108
Identities = 186/188 (98%)
Strand = Plus / Minus
Query: 1 atcaatataattattagctctcttagcttaatggttaaagcctaatacttctaatattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6419 atcaatataattattagctctcttagcttaatggttaaagcctaatacttctaatattaa 6360
Query: 61 kattctatgttcgagtcatagagagagtattatattataaaawtaatataggtataagtt 120
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6359 gattctatgttcgagtcatagagagagtattatattataaaaataatataggtataagtt 6300
Query: 121 aattggtaaactgaatgtcttccaaacattgaatgcgagttcaagtctcgctacctataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6299 aattggtaaactgaatgtcttccaaacattgaatgcgagttcaagtctcgctacctataa 6240
Query: 181 tatatata 188
||||||||
Sbjct: 6239 tatatata 6232
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.47 0.724 1.38
Gapped
Lambda K H
1.47 0.724 1.38
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 21,128
Number of Sequences: 1807
Number of extensions: 21128
Number of successful extensions: 8587
Number of sequences better than 1.0e-20: 1
length of query: 472
length of database: 10,358,551
effective HSP length: 15
effective length of query: 457
effective length of database: 10,331,446
effective search space: 4721470822
effective search space used: 4721470822
T: 0
A: 40
X1: 5 (10.6 bits)
X2: 14 (29.7 bits)
S1: 11 (23.8 bits)
S2: 47 (100.0 bits)